Everything about The Five Prime Untranslated Region totally explained
The
five prime untranslated region (
5' UTR), also known as the
leader sequence, is a particular section of
messenger RNA (mRNA) and the DNA that codes for it. It starts at the +1 position (where
transcription begins) and ends just before the
start codon (usually AUG) of the
coding region. It usually contains a
ribosome binding site (RBS), in
bacteria also known as the
Shine Dalgarno sequence (AGGAGGU). The 5' UTR may be a hundred or more nucleotides long, and the 3' UTR may be even longer (up to several kilobases inlength) (Molecular Cell Biology, 5th edition, Lodish et al. p113, chapter 4.2).
An mRNA molecule codes for a
protein through
translation. The mRNA also contains regions that are not translated: in eukaryotes this includes the
5' untranslated region,
3' untranslated region,
5' cap and
poly-A tail.
In prokaryotic mRNA the 5' UTR is normally short. Some viruses and cellular genes have unusual long structured 5' UTRs which may have roles in
gene expression.
Several
regulatory sequences may be found in the 5' UTR:
- Binding sites for proteins, that may effect the mRNA's stability or translation, for example iron responsive elements, which occur in the 5' UTRs (and 3' UTRs) of a small number of eukaryotic mRNAs that regulate gene expression in response to iron.
- Regulatory elements that don't depend on proteins, such as riboswitches.
- Sequences that promote the initiation of translation.
Further Information
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